STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_203614Homeobox protein 4. (1180 aa)    
Predicted Functional Partners:
MMYC01_210062
Transcription factor of morphogenesis MCM1.
   
 
 0.796
MMYC01_210634
Homeobox protein meis3.
     
0.589
MMYC01_210159
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.574
MMYC01_202403
Histone deacetylase RPD3.
    
 0.574
MMYC01_201810
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
    
 
 0.484
MMYC01_201820
Cryparin.
      
 0.475
MMYC01_206222
Uncharacterized protein.
  
 
   0.471
MMYC01_209737
GAR domain-containing protein.
  
 
   0.463
MMYC01_208675
Transcriptional regulator prz1.
  
 
 
 0.460
MMYC01_209226
Histone deacetylase HOS3.
    
  0.456
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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