STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_203589Sorbitol dehydrogenase. (435 aa)    
Predicted Functional Partners:
MMYC01_200658
NAD(P)H-dependent D-xylose reductase XYR1.
   
 0.832
MMYC01_203869
Phosphotransferase.
   
 
 0.829
MMYC01_202910
L-arabinitol 4-dehydrogenase.
  
  
 
0.819
MMYC01_205508
Phosphotransferase.
   
 
 0.814
MMYC01_204572
Phosphotransferase.
   
 
 0.814
MMYC01_209145
Sorbose reductase SOU1.
 
 
 
 0.813
MMYC01_203539
Ketohexokinase.
   
 
 0.808
MMYC01_204016
Sorbitol dehydrogenase.
  
  
 
0.807
MMYC01_202587
Putative D-xylulose kinase A.
  
 
 0.643
MMYC01_204901
Glycerol 2-dehydrogenase (NADP(+)).
   
 0.589
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.