STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_202816Cx9C motif-containing protein 4, mitochondrial. (83 aa)    
Predicted Functional Partners:
MMYC01_207311
Histone H2B; Belongs to the histone H2B family.
   
 0.992
MMYC01_200912
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
   
 0.982
MMYC01_208427
Histone H2A; Belongs to the histone H2A family.
   
 0.949
MMYC01_200969
Ubiquitin-like domain-containing protein.
    
 0.949
MMYC01_207540
ISWI chromatin-remodeling complex ATPase ISW2.
   
 0.933
MMYC01_209843
Histone H3; Belongs to the histone H3 family.
   
 0.928
MMYC01_207123
Histone H3-like centromeric protein hH3v.
   
 0.928
MMYC01_203892
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
  0.919
MMYC01_200012
BRCT-containing protein 1.
    
 0.917
MMYC01_202369
DNA-directed RNA polymerase II subunit RPB3.
    
 0.910
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.