STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_201900Ureidoglycolate lyase. (297 aa)    
Predicted Functional Partners:
MMYC01_209947
Elongation factor 3.
   
   0.985
MMYC01_201312
[NU+] prion formation protein 1.
   
   0.985
MMYC01_203711
Ribosomal_L23eN domain-containing protein.
   
 0.980
MMYC01_202658
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.980
MMYC01_202025
KOW domain-containing protein.
   
 0.980
MMYC01_209028
Ribosomal_L14e domain-containing protein.
   
 0.978
MMYC01_203963
Uncharacterized protein.
   
 0.978
MMYC01_200235
Uncharacterized protein.
   
 0.978
MMYC01_209762
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.977
MMYC01_205612
Ribosomal_L7Ae domain-containing protein.
   
 0.977
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.