STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_202106Ribosome biogenesis protein tsr1. (316 aa)    
Predicted Functional Partners:
MMYC01_209865
Bystin.
   
 0.995
MMYC01_205368
Protein LTV1.
   
 0.992
MMYC01_210296
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
   
 0.990
MMYC01_202212
Pre-rRNA-processing protein PNO1.
   
 0.984
MMYC01_205927
Serine/threonine-protein kinase rio2.
   
 0.982
MMYC01_205608
rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family.
   
 
 0.981
MMYC01_201409
Ribosomal RNA-processing protein 12.
   
 
 0.981
MMYC01_208190
Uncharacterized protein.
   
 0.956
MMYC01_206070
Ribosomal_S10 domain-containing protein.
    
 0.943
MMYC01_206488
Ribosomal_S13_N domain-containing protein; Belongs to the universal ribosomal protein uS15 family.
    
  0.939
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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