STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_202490Protein FLOWERING LOCUS D. (483 aa)    
Predicted Functional Partners:
MMYC01_201507
Tryptophan synthase.
     
 0.843
MMYC01_202962
Chromatin remodeling factor mit1.
    
 0.765
MMYC01_201462
Histone acetyltransferase type B subunit 2.
    
 0.729
MMYC01_200912
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.727
MMYC01_206323
DNA damage-responsive transcriptional repressor RPH1.
   
 0.718
MMYC01_207311
Histone H2B; Belongs to the histone H2B family.
    
  0.716
MMYC01_210159
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.703
MMYC01_202403
Histone deacetylase RPD3.
   
 0.703
MMYC01_202557
Putative squalene synthase.
   
 
 0.701
MMYC01_205852
Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
     
 0.654
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.