STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_202668GPI-anchored CFEM domain protein A. (286 aa)    
Predicted Functional Partners:
MMYC01_207269
Putative ubiquitin-conjugating enzyme protein 17.
   
 0.804
MMYC01_208538
Ankyrin repeat, PH and SEC7 domain containing protein secG.
    
 0.772
MMYC01_204005
Transcription factor prr1.
   
 0.743
MMYC01_207675
TNF receptor-associated factor 6.
   
 0.690
MMYC01_200743
Glycerophosphodiester phosphodiesterase GDE1.
    
 0.671
MMYC01_204383
Rho-type GTPase-activating protein 1.
    
 0.638
MMYC01_205404
Ankyrin repeat protein nuc-2.
    
 0.629
MMYC01_203546
6-phosphogluconate phosphatase.
    
 0.597
MMYC01_207922
FMN reductase (NADH) NtaB.
    
 0.586
MMYC01_208955
Tuberous sclerosis 1 protein.
    
 0.586
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.