STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_201115Vesicle-associated protein 2-2. (283 aa)    
Predicted Functional Partners:
MMYC01_204981
Oxysterol-binding protein 2; Belongs to the OSBP family.
    
 0.995
MMYC01_202908
Endoplasmic reticulum transmembrane protein 3.
   
 0.877
MMYC01_203160
Putative asparagine synthetase [glutamine-hydrolyzing].
 
      0.764
MMYC01_200655
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
   
 0.761
MMYC01_204014
Integral membrane protein sed5.
    
 0.747
MMYC01_210262
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1; Subunit of the oligosaccharyl transferase (OST) complex that catalyzes the initial transfer of a defined glycan (Glc(3)Man(9)GlcNAc(2) in eukaryotes) from the lipid carrier dolichol- pyrophosphate to an asparagine residue within an Asn-X-Ser/Thr consensus motif in nascent polypeptide chains, the first step in protein N-glycosylation. N-glycosylation occurs cotranslationally and the complex associates with the Sec61 complex at the channel-forming translocon complex that mediates protein translocation across the [...]
    
 0.738
MMYC01_201200
Protein phosphatase 2C 4.
    
 0.729
MMYC01_201033
Phosphatidylinositol 4-kinase STT4; Belongs to the PI3/PI4-kinase family.
    
 
 0.715
MMYC01_206850
Clock-controlled protein 8.
   
 
 0.699
MMYC01_203223
Putative steroid-binding protein 3; Belongs to the cytochrome b5 family.
   
  0.673
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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