STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_201839Calpain-D; Belongs to the peptidase C2 family. (1108 aa)    
Predicted Functional Partners:
MMYC01_203027
Programmed cell death protein 6.
   
 0.798
MMYC01_207910
pH-response transcription factor pacc-1.
   
 0.514
MMYC01_208200
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
    
  0.465
MMYC01_202326
Serine/threonine-protein phosphatase.
    
  0.465
MMYC01_206893
Vacuolar-sorting protein SNF7.
    
 
 0.464
MMYC01_200110
Monopolin complex subunit pcs1.
    
 
 0.416
MMYC01_209795
Topoisomerase I damage affected protein 4.
    
 
 0.400
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.