STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_201701Vacuolar segregation protein pep7. (666 aa)    
Predicted Functional Partners:
MMYC01_207137
Vacuolar protein sorting-associated protein 45; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.991
MMYC01_200355
GTP-binding protein ypt4.
    
 0.979
MMYC01_203613
Ras-like GTP-binding protein RYL2.
   
 0.944
MMYC01_200347
GTP-binding protein ypt5.
   
 0.944
MMYC01_203416
Calcium channel YVC1.
 
 
    0.873
MMYC01_205913
Puromycin N-acetyltransferase.
    
 0.852
MMYC01_206703
Putative increased recombination centers protein 11.
    
 0.852
MMYC01_210260
Beige protein 1.
     
 0.820
MMYC01_202081
Phosphatidylinositol 3-kinase VPS34.
   
 0.725
MMYC01_210165
Vacuolar protein sorting-associated protein 18.
    
 
 0.643
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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