STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_202201Serine/threonine-protein kinase prp4. (821 aa)    
Predicted Functional Partners:
MMYC01_208153
Pre-mRNA-processing-splicing factor 8.
    
 
 0.920
MMYC01_203536
RNA-binding protein 25.
   
  0.877
MMYC01_206492
Splicing factor 3B subunit 1.
   
 
 0.872
MMYC01_205811
WD_REPEATS_REGION domain-containing protein.
    
 
 0.870
MMYC01_205130
Putative mRNA-splicing protein ubp10.
    
   0.852
MMYC01_202101
SART-1 family protein DOT2.
   
   0.852
MMYC01_208723
Pre-mRNA-processing factor 31.
    
 
 0.824
MMYC01_200890
Pre-mRNA-splicing factor dre4.
   
  0.824
MMYC01_200512
Pre-mRNA-splicing factor brr2.
    
 
 0.819
MMYC01_202592
Pre-mRNA-splicing ATP-dependent RNA helicase PRP28; Belongs to the DEAD box helicase family.
 
 
 0.816
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.