STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_201338RBR-type E3 ubiquitin transferase. (529 aa)    
Predicted Functional Partners:
MMYC01_203707
E3 ubiquitin-protein ligase RBX1.
    
 0.918
MMYC01_200969
Ubiquitin-like domain-containing protein.
    
  0.907
MMYC01_201340
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
 
      0.899
MMYC01_204006
Putative translation initiation factor eIF-2B subunit epsilon.
 
      0.890
MMYC01_204897
Ubiquitin conjugating enzyme E2 B.
    
 0.888
MMYC01_205387
Ubiquitin-like domain-containing protein.
    
 0.879
MMYC01_208388
Transcription factor TOXE.
    
 0.879
MMYC01_206171
PIPK domain-containing protein.
 
  
   0.878
MMYC01_202084
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.791
MMYC01_204644
Cullin-1; Belongs to the cullin family.
  
 0.775
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.