STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_201133Nuclear envelope morphology protein 1. (450 aa)    
Predicted Functional Partners:
MMYC01_200626
Nuclear elongation and deformation protein 1.
    
 0.955
MMYC01_209224
Sporulation-specific protein spo7.
    
 0.944
MMYC01_203622
Transcription initiation factor IIF subunit alpha.
    
 0.914
MMYC01_203141
Mitochondrial import inner membrane translocase subunit tim23.
    
 0.811
MMYC01_201024
DNA-directed RNA polymerase II subunit rpb4.
    
 0.777
MMYC01_206499
Transcription initiation factor IIF subunit beta.
    
 0.769
MMYC01_204040
Mitochondrial import inner membrane translocase subunit tim21.
    
 0.759
MMYC01_202503
Mitochondrial import inner membrane translocase subunit tim17.
   
 0.744
MMYC01_208206
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
 0.743
MMYC01_200998
DNA-directed RNA polymerases I, II, and III subunit RPABC1.
   
 0.740
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.