STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_200597CsbD domain-containing protein. (181 aa)    
Predicted Functional Partners:
MMYC01_209670
Glutamate--cysteine ligase.
   
 0.956
MMYC01_201507
Tryptophan synthase.
    
  0.811
MMYC01_200598
Cysteine desulfurase, mitochondrial.
 
   
  0.805
MMYC01_204270
Cysteine synthase 2.
   
 0.718
MMYC01_201510
Aspartate aminotransferase.
   
  0.700
MMYC01_200901
Aspartate aminotransferase.
   
  0.700
MMYC01_205073
Indoleamine 2,3-dioxygenase.
 
 
    0.695
MMYC01_202841
Delta-1-pyrroline-5-carboxylate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
   
  0.695
MMYC01_200166
Cysteine dioxygenase.
   
 
  0.692
MMYC01_207748
Glutathione synthetase.
   
 0.674
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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