STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_201249Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (295 aa)    
Predicted Functional Partners:
MMYC01_202956
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.982
MMYC01_203707
E3 ubiquitin-protein ligase RBX1.
    
 0.976
MMYC01_204644
Cullin-1; Belongs to the cullin family.
   
 0.967
MMYC01_202938
Cullin-3-B; Belongs to the cullin family.
   
 0.966
MMYC01_206682
Cullin-4B; Belongs to the cullin family.
    
 0.885
MMYC01_205763
Cullin-associated NEDD8-dissociated protein 1, C-terminal part.
    
 0.843
MMYC01_204584
NEDD8-activating enzyme E1 catalytic subunit.
    
 0.822
MMYC01_205387
Ubiquitin-like domain-containing protein.
    
 0.782
MMYC01_208388
Transcription factor TOXE.
    
 0.782
MMYC01_209404
Protein BOI2.
    
 0.778
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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