STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_200347GTP-binding protein ypt5. (219 aa)    
Predicted Functional Partners:
MMYC01_202081
Phosphatidylinositol 3-kinase VPS34.
    
 0.961
MMYC01_201701
Vacuolar segregation protein pep7.
   
 0.944
MMYC01_210451
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.910
MMYC01_205551
Rab GDP-dissociation inhibitor.
   
 0.910
MMYC01_204109
Vacuolar protein sorting-associated protein 9b.
    
 0.875
MMYC01_204108
Vacuolar protein sorting-associated protein 9b.
    
 0.875
MMYC01_202177
Ankyrin-1.
    
 0.868
MMYC01_203974
Rab proteins geranylgeranyltransferase; Belongs to the Rab GDI family.
    
 0.846
MMYC01_200350
MICOS complex subunit MIC60; Component of the MICOS complex, a large protein complex of the mitochondrial inner membrane that plays crucial roles in the maintenance of crista junctions, inner membrane architecture, and formation of contact sites to the outer membrane.
 
      0.844
MMYC01_202126
Vacuolar morphogenesis protein 6.
   
 
 0.836
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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