STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_200315Peroxisomal biogenesis factor 19. (315 aa)    
Predicted Functional Partners:
MMYC01_202885
Peroxisomal membrane protein PAS20.
    
 0.995
MMYC01_200009
Peroxisomal membrane protein PER10.
    
 0.987
MMYC01_206775
Peroxisomal membrane protein PMP30B.
   
 0.983
MMYC01_205574
Peroxisomal membrane protein PEX16.
    
 0.951
MMYC01_202594
T-complex protein 1 subunit delta.
    
 
 0.924
MMYC01_200930
Peroxisome biogenesis factor 10.
    
 
 0.886
MMYC01_202448
RING-type domain-containing protein.
    
 
 0.844
MMYC01_200989
Mitochondrial fission 1 protein; Has a role in mitochondrial fission.
    
 0.839
MMYC01_200740
ATP-binding cassette sub-family D member 1.
    
 0.835
MMYC01_200657
Peroxisomal long-chain fatty acid import protein 2.
    
 0.835
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.