STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_200543Histidine--tRNA ligase, mitochondrial. (528 aa)    
Predicted Functional Partners:
MMYC01_200624
Histidine biosynthesis trifunctional protein.
    
 0.904
MMYC01_203651
Serine/threonine-protein kinase GCN2.
     
0.891
MMYC01_203606
Eukaryotic translation initiation factor 2 subunit alpha.
   
 0.884
MMYC01_208156
ATP phosphoribosyltransferase.
  
 0.862
MMYC01_209947
Elongation factor 3.
   
 
 0.793
MMYC01_201312
[NU+] prion formation protein 1.
   
 
 0.772
MMYC01_205048
Eukaryotic translation initiation factor 2 subunit gamma.
   
 0.741
MMYC01_207337
tRNA-aminoacylation cofactor ARC1.
  
 
 0.735
MMYC01_200066
Lysine--tRNA ligase.
   
 
 0.724
MMYC01_200646
Putative threonine--tRNA ligase, mitochondrial.
  
 
 0.705
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.