Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0269 | CHISP_0270 | Cell division protein FtsW. | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase. | 0.929 |
CHISP_0269 | CHISP_0271 | Cell division protein FtsW. | UDP-N-acetylmuramate--alanine ligase. | 0.957 |
CHISP_0269 | CHISP_0272 | Cell division protein FtsW. | Hypothetical protein. | 0.985 |
CHISP_0269 | CHISP_0273 | Cell division protein FtsW. | Cell division protein FtsA. | 0.906 |
CHISP_0269 | CHISP_0274 | Cell division protein FtsW. | Cell division protein FtsZ. | 0.855 |
CHISP_0269 | CHISP_2291 | Cell division protein FtsW. | Rare lipoprotein A. | 0.906 |
CHISP_0269 | CHISP_2325 | Cell division protein FtsW. | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase. | 0.951 |
CHISP_0269 | CHISP_2331 | Cell division protein FtsW. | Cell division protein FtsK. | 0.634 |
CHISP_0269 | CHISP_2336 | Cell division protein FtsW. | Rod shape-determining protein MreB. | 0.635 |
CHISP_0270 | CHISP_0269 | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase. | Cell division protein FtsW. | 0.929 |
CHISP_0270 | CHISP_0271 | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase. | UDP-N-acetylmuramate--alanine ligase. | 0.990 |
CHISP_0270 | CHISP_0272 | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase. | Hypothetical protein. | 0.967 |
CHISP_0270 | CHISP_0273 | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase. | Cell division protein FtsA. | 0.879 |
CHISP_0270 | CHISP_0274 | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase. | Cell division protein FtsZ. | 0.911 |
CHISP_0271 | CHISP_0269 | UDP-N-acetylmuramate--alanine ligase. | Cell division protein FtsW. | 0.957 |
CHISP_0271 | CHISP_0270 | UDP-N-acetylmuramate--alanine ligase. | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase. | 0.990 |
CHISP_0271 | CHISP_0272 | UDP-N-acetylmuramate--alanine ligase. | Hypothetical protein. | 0.965 |
CHISP_0271 | CHISP_0273 | UDP-N-acetylmuramate--alanine ligase. | Cell division protein FtsA. | 0.886 |
CHISP_0271 | CHISP_0274 | UDP-N-acetylmuramate--alanine ligase. | Cell division protein FtsZ. | 0.764 |
CHISP_0271 | CHISP_2325 | UDP-N-acetylmuramate--alanine ligase. | UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase. | 0.994 |
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