STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_033030S ribosomal protein S1p. (604 aa)    
Predicted Functional Partners:
CHISP_1388
30S ribosomal protein S2p (SAe).
  
 0.992
CHISP_1624
50S ribosomal protein L10p (P0).
   
 0.991
CHISP_1628
30S ribosomal protein S12p (S23e).
   
 0.991
CHISP_1629
30S ribosomal protein S7p (S5e).
   
 0.991
CHISP_1631
30S ribosomal protein S10p (S20e).
  
 0.991
CHISP_1633
50S ribosomal protein L4p (L1e).
  
 0.991
CHISP_1646
30S ribosomal protein S8p (S15Ae).
   
 0.991
CHISP_1655
30S ribosomal protein S11p (S14e).
   
 0.991
CHISP_1656
30S ribosomal protein S4p (S9e).
   
 0.991
CHISP_1639
50S ribosomal protein L16p (L10e).
  
 0.990
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.