STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_0404Ankyrin 1. (224 aa)    
Predicted Functional Partners:
CHISP_1856
Peptidyl-prolyl cis-trans isomerase.
    
 0.943
CHISP_1907
Hypothetical protein.
 
 
 0.917
CHISP_0666
ATP-dependent helicase HepA.
    
 0.912
CHISP_2134
Metallophosphoesterase.
    
 0.907
CHISP_2875
Metallophosphatase.
    
 0.907
CHISP_1638
30S ribosomal protein S3p (S3e).
    
 0.906
CHISP_1824
Exonuclease SbcD.
    
  0.904
CHISP_3316
Sulfate transporter family protein.
    
 0.904
CHISP_3699
Sulfate permease.
    
 0.904
CHISP_0462
TPR repeat-containing protein.
 
 0.900
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.