STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_0437N,N'-diacetylchitobiose/cellobiose phosphorylase. (849 aa)    
Predicted Functional Partners:
CHISP_1332
Endo-1,4-beta-glucanase.
  
  
 0.894
CHISP_2683
Endoglucanase.
  
  
 0.841
CHISP_0803
beta-N-acetylhexosaminidase.
  
  
 0.833
CHISP_3415
Beta-glucosidase.
    
 0.819
CHISP_1732
Glucokinase.
     
 0.790
CHISP_1194
Endo-1,4-beta-glucanase.
  
  
 0.788
CHISP_0180
N-acetylglucosamine-1-P-mutase.
    
 0.782
CHISP_0260
N-acetylglucosamine-1-P-mutase.
    
 0.782
CHISP_3204
N-acetylglucosamine-1-P-mutase.
    
 0.782
CHISP_1102
Endo-1,4-beta-glucanase.
  
  
 0.724
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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