STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_0448TonB domain-containing protein. (174 aa)    
Predicted Functional Partners:
CHISP_0450
Adventurous gliding motility protein S.
 
 
 0.987
CHISP_0452
Flagellar motor protein MotA.
 
 
 0.985
CHISP_0908
Adventurous gliding motility protein S.
 
 
 0.948
CHISP_0910
Biopolymer transport protein ExbD.
 
 
 0.946
CHISP_0911
Biopolymer transport protein ExbB.
 
 
 0.944
CHISP_1871
Biopolymer transport protein ExbB/TolQ.
 
 
 0.916
CHISP_0453
TPR-domain containing protein.
 
     0.874
CHISP_1875
TonB family protein.
 
 
 0.850
CHISP_3273
MotA/TolQ/ExbB proton channel family protein.
 
 
 0.846
CHISP_3275
Biopolymer transport protein ExbD/TolR.
 
 
 0.842
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.