STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_0459Heat-inducible transcription repressor HrcA. (345 aa)    
Predicted Functional Partners:
CHISP_0458
Heat shock protein GrpE.
  
  
 0.973
CHISP_0457
Chaperone protein DnaJ.
  
  
 0.942
CHISP_0460
Heat shock protein 60 family chaperone GroEL.
  
  
 0.888
CHISP_0970
Chaperone protein DnaK.
  
  
 0.841
CHISP_2611
Chaperone protein DnaK.
  
  
 0.841
CHISP_2612
DnaK-related protein.
  
  
 0.841
CHISP_1618
ATP-dependent Clp protease proteolytic subunit.
   
  
 0.824
CHISP_1756
ATP-dependent Clp protease proteolytic subunit.
   
  
 0.824
CHISP_0461
Heat shock protein 60 family co-chaperone GroES.
  
  
 0.690
CHISP_0358
Type VI secretion system ATPase, ClpV1 family.
  
  
 0.676
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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