Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0358 | CHISP_0457 | Type VI secretion system ATPase, ClpV1 family. | Chaperone protein DnaJ. | 0.972 |
CHISP_0358 | CHISP_0458 | Type VI secretion system ATPase, ClpV1 family. | Heat shock protein GrpE. | 0.880 |
CHISP_0358 | CHISP_0459 | Type VI secretion system ATPase, ClpV1 family. | Heat-inducible transcription repressor HrcA. | 0.676 |
CHISP_0358 | CHISP_0460 | Type VI secretion system ATPase, ClpV1 family. | Heat shock protein 60 family chaperone GroEL. | 0.715 |
CHISP_0358 | CHISP_0461 | Type VI secretion system ATPase, ClpV1 family. | Heat shock protein 60 family co-chaperone GroES. | 0.718 |
CHISP_0358 | CHISP_0970 | Type VI secretion system ATPase, ClpV1 family. | Chaperone protein DnaK. | 0.915 |
CHISP_0358 | CHISP_1618 | Type VI secretion system ATPase, ClpV1 family. | ATP-dependent Clp protease proteolytic subunit. | 0.947 |
CHISP_0358 | CHISP_1756 | Type VI secretion system ATPase, ClpV1 family. | ATP-dependent Clp protease proteolytic subunit. | 0.947 |
CHISP_0358 | CHISP_2611 | Type VI secretion system ATPase, ClpV1 family. | Chaperone protein DnaK. | 0.915 |
CHISP_0358 | CHISP_2612 | Type VI secretion system ATPase, ClpV1 family. | DnaK-related protein. | 0.915 |
CHISP_0457 | CHISP_0358 | Chaperone protein DnaJ. | Type VI secretion system ATPase, ClpV1 family. | 0.972 |
CHISP_0457 | CHISP_0458 | Chaperone protein DnaJ. | Heat shock protein GrpE. | 0.997 |
CHISP_0457 | CHISP_0459 | Chaperone protein DnaJ. | Heat-inducible transcription repressor HrcA. | 0.942 |
CHISP_0457 | CHISP_0460 | Chaperone protein DnaJ. | Heat shock protein 60 family chaperone GroEL. | 0.984 |
CHISP_0457 | CHISP_0461 | Chaperone protein DnaJ. | Heat shock protein 60 family co-chaperone GroES. | 0.858 |
CHISP_0457 | CHISP_0970 | Chaperone protein DnaJ. | Chaperone protein DnaK. | 0.999 |
CHISP_0457 | CHISP_1618 | Chaperone protein DnaJ. | ATP-dependent Clp protease proteolytic subunit. | 0.584 |
CHISP_0457 | CHISP_1756 | Chaperone protein DnaJ. | ATP-dependent Clp protease proteolytic subunit. | 0.584 |
CHISP_0457 | CHISP_2611 | Chaperone protein DnaJ. | Chaperone protein DnaK. | 0.990 |
CHISP_0457 | CHISP_2612 | Chaperone protein DnaJ. | DnaK-related protein. | 0.990 |
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