STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_0507ABC transporter, ATP-binding protein. (230 aa)    
Predicted Functional Partners:
CHISP_1095
Macrolide export ATP-binding/permease protein MacB.
 0.995
CHISP_1096
Macrolide export ATP-binding/permease protein MacB.
 0.995
CHISP_3250
ABC-type antimicrobial peptide transport system, permease component.
 0.995
CHISP_0508
ABC-type transport system, involved in lipoprotein release, permease component.
 
 0.992
CHISP_0509
ABC-type transport system, involved in lipoprotein release, permease component.
 
 0.986
CHISP_3683
ABC transporter permease protein.
 0.967
CHISP_0510
Outer membrane lipoprotein-sorting protein.
 
 
 
 0.947
CHISP_2607
Gliding motility-associated ABC transporter ATP-binding subunit GldA.
 
  
0.936
CHISP_0821
Lipoprotein releasing system transmembrane protein LolC.
 0.928
CHISP_2919
Oligopeptide transport ATP-binding protein OppD.
 
   
 
0.905
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.