Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0713 | CHISP_0714 | Capsular exopolysaccharide family protein. | Polysaccharide export protein. | 0.988 |
CHISP_0713 | CHISP_0906 | Capsular exopolysaccharide family protein. | Polysaccharide export lipoprotein. | 0.980 |
CHISP_0713 | CHISP_1002 | Capsular exopolysaccharide family protein. | Capsule polysaccharide export protein. | 0.984 |
CHISP_0713 | CHISP_1074 | Capsular exopolysaccharide family protein. | Undecaprenyl-phosphate galactosephosphotransferase. | 0.993 |
CHISP_0713 | CHISP_1270 | Capsular exopolysaccharide family protein. | Glycosyl transferase family 2. | 0.996 |
CHISP_0713 | CHISP_1331 | Capsular exopolysaccharide family protein. | Undecaprenyl-phosphate galactosephosphotransferase. | 0.993 |
CHISP_0713 | CHISP_1724 | Capsular exopolysaccharide family protein. | Glycosyl transferase, family 2. | 0.996 |
CHISP_0713 | CHISP_1735 | Capsular exopolysaccharide family protein. | Undecaprenyl-phosphate glucose phosphotransferase. | 0.992 |
CHISP_0713 | CHISP_1774 | Capsular exopolysaccharide family protein. | Capsule polysaccharide export protein. | 0.962 |
CHISP_0713 | CHISP_2041 | Capsular exopolysaccharide family protein. | Polysaccharide export protein. | 0.962 |
CHISP_0714 | CHISP_0713 | Polysaccharide export protein. | Capsular exopolysaccharide family protein. | 0.988 |
CHISP_0714 | CHISP_0906 | Polysaccharide export protein. | Polysaccharide export lipoprotein. | 0.695 |
CHISP_0714 | CHISP_1002 | Polysaccharide export protein. | Capsule polysaccharide export protein. | 0.506 |
CHISP_0714 | CHISP_1074 | Polysaccharide export protein. | Undecaprenyl-phosphate galactosephosphotransferase. | 0.910 |
CHISP_0714 | CHISP_1270 | Polysaccharide export protein. | Glycosyl transferase family 2. | 0.951 |
CHISP_0714 | CHISP_1331 | Polysaccharide export protein. | Undecaprenyl-phosphate galactosephosphotransferase. | 0.910 |
CHISP_0714 | CHISP_1724 | Polysaccharide export protein. | Glycosyl transferase, family 2. | 0.957 |
CHISP_0714 | CHISP_1735 | Polysaccharide export protein. | Undecaprenyl-phosphate glucose phosphotransferase. | 0.910 |
CHISP_0714 | CHISP_2041 | Polysaccharide export protein. | Polysaccharide export protein. | 0.665 |
CHISP_0906 | CHISP_0713 | Polysaccharide export lipoprotein. | Capsular exopolysaccharide family protein. | 0.980 |
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