STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_0729CoA-disulfide reductase. (653 aa)    
Predicted Functional Partners:
CHISP_0063
Ferredoxin--sulfite reductase.
  
 0.983
CHISP_1416
50S ribosomal protein L31.
  
  
 0.976
CHISP_1005
Riboflavin synthase subunit alpha.
   
    0.974
CHISP_1679
Superoxide dismutase.
  
 0.973
CHISP_1152
Cysteine desulfurase.
   
 0.972
CHISP_3417
Cysteine desulfurase.
   
 0.972
CHISP_2227
Hydroxyacylglutathione hydrolase.
  
 0.967
CHISP_2447
Hydroxyacylglutathione hydrolase.
  
 0.967
CHISP_3186
30S ribosomal protein S16p.
  
 0.960
CHISP_1641
30S ribosomal protein S17p (S11e).
  
  0.957
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.