STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_0737Hypothetical protein. (221 aa)    
Predicted Functional Partners:
CHISP_2010
Phosphoribosyl transferase domain protein.
     0.977
CHISP_1890
Erythromycin esterase-like enzyme.
     0.930
CHISP_1685
Protein-L-isoaspartate O-methyltransferase.
     0.733
CHISP_2064
Protein-L-isoaspartate O-methyltransferase.
     0.724
CHISP_1766
Damage-inducible protein CinA.
  
 
  0.714
CHISP_3200
Poly-gamma-glutamate synthesis protein.
 
     0.711
CHISP_2383
ATP-dependent DNA helicase pcrA.
 
      0.710
CHISP_0456
GMP synthase [glutamine-hydrolyzing].
    
  0.663
CHISP_3351
Inosine-5'-monophosphate dehydrogenase.
    
  0.655
CHISP_1801
Peptidase M50.
 
  
  0.548
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.