STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_0803beta-N-acetylhexosaminidase. (621 aa)    
Predicted Functional Partners:
CHISP_1732
Glucokinase.
  
 
 0.837
CHISP_0437
N,N'-diacetylchitobiose/cellobiose phosphorylase.
  
  
 0.833
CHISP_2965
N,N'-diacetylchitobiose/cellobiose phosphorylase.
  
  
 0.825
CHISP_2932
N,N'-diacetylchitobiose/cellobiose phosphorylase.
  
  
 0.817
CHISP_0626
Chitinase, GH18 family.
 
  
 0.816
CHISP_2284
Alpha-glucosidase.
 
 
 0.776
CHISP_0804
NUDIX domain protein.
       0.773
CHISP_1966
Glucosamine-6-phosphate deaminase.
 
   
 0.767
CHISP_1878
Beta-glucanase.
 
  
  0.720
CHISP_0765
Chitinase, GH18 family.
 
  
 0.691
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.