Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0448 | CHISP_0452 | TonB domain-containing protein. | Flagellar motor protein MotA. | 0.985 |
CHISP_0448 | CHISP_0908 | TonB domain-containing protein. | Adventurous gliding motility protein S. | 0.948 |
CHISP_0448 | CHISP_0910 | TonB domain-containing protein. | Biopolymer transport protein ExbD. | 0.946 |
CHISP_0448 | CHISP_0911 | TonB domain-containing protein. | Biopolymer transport protein ExbB. | 0.944 |
CHISP_0448 | CHISP_0913 | TonB domain-containing protein. | TPR-domain containing protein. | 0.777 |
CHISP_0448 | CHISP_0914 | TonB domain-containing protein. | TPR-domain containing protein. | 0.786 |
CHISP_0448 | CHISP_1871 | TonB domain-containing protein. | Biopolymer transport protein ExbB/TolQ. | 0.916 |
CHISP_0448 | CHISP_1875 | TonB domain-containing protein. | TonB family protein. | 0.850 |
CHISP_0452 | CHISP_0448 | Flagellar motor protein MotA. | TonB domain-containing protein. | 0.985 |
CHISP_0452 | CHISP_0907 | Flagellar motor protein MotA. | Putative abductin-like protein. | 0.731 |
CHISP_0452 | CHISP_0908 | Flagellar motor protein MotA. | Adventurous gliding motility protein S. | 0.947 |
CHISP_0452 | CHISP_0910 | Flagellar motor protein MotA. | Biopolymer transport protein ExbD. | 0.930 |
CHISP_0452 | CHISP_0913 | Flagellar motor protein MotA. | TPR-domain containing protein. | 0.691 |
CHISP_0452 | CHISP_0914 | Flagellar motor protein MotA. | TPR-domain containing protein. | 0.726 |
CHISP_0452 | CHISP_0925 | Flagellar motor protein MotA. | Biopolymer transporter TonB. | 0.938 |
CHISP_0452 | CHISP_1875 | Flagellar motor protein MotA. | TonB family protein. | 0.857 |
CHISP_0907 | CHISP_0452 | Putative abductin-like protein. | Flagellar motor protein MotA. | 0.731 |
CHISP_0907 | CHISP_0908 | Putative abductin-like protein. | Adventurous gliding motility protein S. | 0.946 |
CHISP_0907 | CHISP_0910 | Putative abductin-like protein. | Biopolymer transport protein ExbD. | 0.946 |
CHISP_0907 | CHISP_0911 | Putative abductin-like protein. | Biopolymer transport protein ExbB. | 0.935 |
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