Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0040 | CHISP_0081 | ABC transporter, permease protein. | ABC transporter, ATP-binding protein. | 0.840 |
CHISP_0040 | CHISP_0941 | ABC transporter, permease protein. | ABC transporter. | 0.473 |
CHISP_0040 | CHISP_0942 | ABC transporter, permease protein. | ABC transporter permease. | 0.764 |
CHISP_0040 | CHISP_0943 | ABC transporter, permease protein. | ABC transporter, ATP-binding protein. | 0.853 |
CHISP_0040 | CHISP_3667 | ABC transporter, permease protein. | Zinc ABC transporter, ATP-binding protein ZnuC. | 0.728 |
CHISP_0081 | CHISP_0040 | ABC transporter, ATP-binding protein. | ABC transporter, permease protein. | 0.840 |
CHISP_0081 | CHISP_0941 | ABC transporter, ATP-binding protein. | ABC transporter. | 0.687 |
CHISP_0081 | CHISP_0942 | ABC transporter, ATP-binding protein. | ABC transporter permease. | 0.824 |
CHISP_0081 | CHISP_0943 | ABC transporter, ATP-binding protein. | ABC transporter, ATP-binding protein. | 0.859 |
CHISP_0081 | CHISP_0985 | ABC transporter, ATP-binding protein. | ABC-type multidrug transport system, permease component. | 0.840 |
CHISP_0081 | CHISP_1253 | ABC transporter, ATP-binding protein. | ABC transporter, permease protein. | 0.840 |
CHISP_0081 | CHISP_2608 | ABC transporter, ATP-binding protein. | Gliding motility-associated ABC transporter permease protein GldF. | 0.878 |
CHISP_0081 | CHISP_2919 | ABC transporter, ATP-binding protein. | Oligopeptide transport ATP-binding protein OppD. | 0.746 |
CHISP_0081 | CHISP_3050 | ABC transporter, ATP-binding protein. | ABC transporter permease. | 0.878 |
CHISP_0081 | CHISP_3667 | ABC transporter, ATP-binding protein. | Zinc ABC transporter, ATP-binding protein ZnuC. | 0.781 |
CHISP_0941 | CHISP_0040 | ABC transporter. | ABC transporter, permease protein. | 0.473 |
CHISP_0941 | CHISP_0081 | ABC transporter. | ABC transporter, ATP-binding protein. | 0.687 |
CHISP_0941 | CHISP_0942 | ABC transporter. | ABC transporter permease. | 0.982 |
CHISP_0941 | CHISP_0943 | ABC transporter. | ABC transporter, ATP-binding protein. | 0.933 |
CHISP_0941 | CHISP_0985 | ABC transporter. | ABC-type multidrug transport system, permease component. | 0.473 |
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