Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0011 | CHISP_0099 | Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). | Sensor histidine kinase AtoS. | 0.989 |
CHISP_0011 | CHISP_0704 | Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). | Sensory box histidine kinase/response regulator. | 0.978 |
CHISP_0011 | CHISP_0893 | Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). | PAS/PAC sensor hybrid histidine kinase. | 0.981 |
CHISP_0011 | CHISP_0954 | Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). | PAS/PAC sensor signal transduction histidine kinase. | 0.969 |
CHISP_0011 | CHISP_1459 | Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). | Sensory transduction regulatory protein. | 0.978 |
CHISP_0011 | CHISP_1540 | Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). | Signal transduction histidine kinase. | 0.984 |
CHISP_0011 | CHISP_1598 | Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). | Sensory box histidine kinase/response regulator. | 0.985 |
CHISP_0011 | CHISP_2148 | Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). | Multi-sensor hybrid histidine kinase. | 0.991 |
CHISP_0011 | CHISP_2416 | Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). | Hypothetical protein. | 0.980 |
CHISP_0011 | CHISP_3726 | Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). | LuxR family transcriptional regulator. | 0.977 |
CHISP_0099 | CHISP_0011 | Sensor histidine kinase AtoS. | Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s). | 0.989 |
CHISP_0099 | CHISP_0704 | Sensor histidine kinase AtoS. | Sensory box histidine kinase/response regulator. | 0.987 |
CHISP_0099 | CHISP_0893 | Sensor histidine kinase AtoS. | PAS/PAC sensor hybrid histidine kinase. | 0.991 |
CHISP_0099 | CHISP_0954 | Sensor histidine kinase AtoS. | PAS/PAC sensor signal transduction histidine kinase. | 0.977 |
CHISP_0099 | CHISP_1459 | Sensor histidine kinase AtoS. | Sensory transduction regulatory protein. | 0.983 |
CHISP_0099 | CHISP_1540 | Sensor histidine kinase AtoS. | Signal transduction histidine kinase. | 0.992 |
CHISP_0099 | CHISP_1598 | Sensor histidine kinase AtoS. | Sensory box histidine kinase/response regulator. | 0.992 |
CHISP_0099 | CHISP_2148 | Sensor histidine kinase AtoS. | Multi-sensor hybrid histidine kinase. | 0.997 |
CHISP_0099 | CHISP_2416 | Sensor histidine kinase AtoS. | Hypothetical protein. | 0.989 |
CHISP_0099 | CHISP_3726 | Sensor histidine kinase AtoS. | LuxR family transcriptional regulator. | 0.995 |
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