Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0183 | CHISP_0717 | Group 1 glycosyl transferase. | Glycosyl transferase. | 0.736 |
CHISP_0183 | CHISP_0989 | Group 1 glycosyl transferase. | alpha-L-arabinofuranosidase/ beta-D-xylosidase. | 0.744 |
CHISP_0183 | CHISP_0990 | Group 1 glycosyl transferase. | Glycosyl transferase. | 0.738 |
CHISP_0717 | CHISP_0183 | Glycosyl transferase. | Group 1 glycosyl transferase. | 0.736 |
CHISP_0717 | CHISP_0989 | Glycosyl transferase. | alpha-L-arabinofuranosidase/ beta-D-xylosidase. | 0.775 |
CHISP_0717 | CHISP_2858 | Glycosyl transferase. | Group 1 glycosyl transferase. | 0.500 |
CHISP_0988 | CHISP_0989 | Metallohydrolase. | alpha-L-arabinofuranosidase/ beta-D-xylosidase. | 0.543 |
CHISP_0988 | CHISP_0990 | Metallohydrolase. | Glycosyl transferase. | 0.530 |
CHISP_0989 | CHISP_0183 | alpha-L-arabinofuranosidase/ beta-D-xylosidase. | Group 1 glycosyl transferase. | 0.744 |
CHISP_0989 | CHISP_0717 | alpha-L-arabinofuranosidase/ beta-D-xylosidase. | Glycosyl transferase. | 0.775 |
CHISP_0989 | CHISP_0988 | alpha-L-arabinofuranosidase/ beta-D-xylosidase. | Metallohydrolase. | 0.543 |
CHISP_0989 | CHISP_0990 | alpha-L-arabinofuranosidase/ beta-D-xylosidase. | Glycosyl transferase. | 0.941 |
CHISP_0989 | CHISP_0991 | alpha-L-arabinofuranosidase/ beta-D-xylosidase. | Hypothetical protein. | 0.463 |
CHISP_0989 | CHISP_2858 | alpha-L-arabinofuranosidase/ beta-D-xylosidase. | Group 1 glycosyl transferase. | 0.480 |
CHISP_0989 | CHISP_2980 | alpha-L-arabinofuranosidase/ beta-D-xylosidase. | AMMECR1 domain protein. | 0.474 |
CHISP_0990 | CHISP_0183 | Glycosyl transferase. | Group 1 glycosyl transferase. | 0.738 |
CHISP_0990 | CHISP_0988 | Glycosyl transferase. | Metallohydrolase. | 0.530 |
CHISP_0990 | CHISP_0989 | Glycosyl transferase. | alpha-L-arabinofuranosidase/ beta-D-xylosidase. | 0.941 |
CHISP_0990 | CHISP_0991 | Glycosyl transferase. | Hypothetical protein. | 0.475 |
CHISP_0990 | CHISP_2858 | Glycosyl transferase. | Group 1 glycosyl transferase. | 0.514 |
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