STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_1019Hypothetical protein. (105 aa)    
Predicted Functional Partners:
CHISP_3434
ATP-dependent DNA helicase RecQ.
    
 
 0.681
CHISP_3115
Hypothetical protein.
    
 
 0.631
CHISP_0785
Trehalose synthase.
    
 0.612
CHISP_2737
Trehalose synthase.
    
 0.612
CHISP_1611
Trehalose 6-phosphate phosphorylase.
   
 
 0.584
CHISP_2928
Tetratricopeptide TPR_2.
    
 0.574
CHISP_2008
Glycogen branching enzyme.
   
  0.560
CHISP_3326
Malto-oligosyltrehalose trehalohydrolase.
   
  0.560
CHISP_1369
Nucleotidyl transferase.
  
 0.538
CHISP_0749
Glycogen phosphorylase.
   
  0.525
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
Server load: low (14%) [HD]