STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_1042Acriflavin resistance protein. (1036 aa)    
Predicted Functional Partners:
CHISP_1043
Putative Co/Zn/Cd efflux system membrane fusion protein.
 0.997
CHISP_2711
Efflux transporter, RND family, MFP subunit.
 
 0.991
CHISP_3057
Efflux transporter, RND family, MFP subunit.
 
 0.990
CHISP_0654
Putative RND efflux membrane fusion protein.
 
 0.989
CHISP_1090
Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family.
 0.987
CHISP_3219
Putative Co/Zn/Cd efflux system membrane fusion protein.
 0.977
CHISP_1098
Efflux transporter, RND family, MFP subunit.
 
 0.976
CHISP_3248
RND efflux system, membrane fusion protein CmeA.
 0.974
CHISP_2710
Acriflavin resistance protein.
 
0.934
CHISP_1095
Macrolide export ATP-binding/permease protein MacB.
  
 0.884
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.