Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0655 | CHISP_1042 | Acriflavin resistance protein. | Acriflavin resistance protein. | 0.715 |
CHISP_0655 | CHISP_1043 | Acriflavin resistance protein. | Putative Co/Zn/Cd efflux system membrane fusion protein. | 0.962 |
CHISP_0655 | CHISP_1044 | Acriflavin resistance protein. | Outer membrane efflux protein. | 0.607 |
CHISP_0655 | CHISP_2710 | Acriflavin resistance protein. | Acriflavin resistance protein. | 0.707 |
CHISP_1042 | CHISP_0655 | Acriflavin resistance protein. | Acriflavin resistance protein. | 0.715 |
CHISP_1042 | CHISP_1043 | Acriflavin resistance protein. | Putative Co/Zn/Cd efflux system membrane fusion protein. | 0.997 |
CHISP_1042 | CHISP_1044 | Acriflavin resistance protein. | Outer membrane efflux protein. | 0.874 |
CHISP_1042 | CHISP_1091 | Acriflavin resistance protein. | Acriflavin resistance protein. | 0.711 |
CHISP_1042 | CHISP_1095 | Acriflavin resistance protein. | Macrolide export ATP-binding/permease protein MacB. | 0.884 |
CHISP_1042 | CHISP_1096 | Acriflavin resistance protein. | Macrolide export ATP-binding/permease protein MacB. | 0.884 |
CHISP_1042 | CHISP_2710 | Acriflavin resistance protein. | Acriflavin resistance protein. | 0.934 |
CHISP_1042 | CHISP_3058 | Acriflavin resistance protein. | Acriflavin resistance protein. | 0.705 |
CHISP_1042 | CHISP_3249 | Acriflavin resistance protein. | ABC-type antimicrobial peptide transport system, ATPase component. | 0.793 |
CHISP_1042 | CHISP_3250 | Acriflavin resistance protein. | ABC-type antimicrobial peptide transport system, permease component. | 0.884 |
CHISP_1043 | CHISP_0655 | Putative Co/Zn/Cd efflux system membrane fusion protein. | Acriflavin resistance protein. | 0.962 |
CHISP_1043 | CHISP_1042 | Putative Co/Zn/Cd efflux system membrane fusion protein. | Acriflavin resistance protein. | 0.997 |
CHISP_1043 | CHISP_1044 | Putative Co/Zn/Cd efflux system membrane fusion protein. | Outer membrane efflux protein. | 0.961 |
CHISP_1043 | CHISP_1091 | Putative Co/Zn/Cd efflux system membrane fusion protein. | Acriflavin resistance protein. | 0.965 |
CHISP_1043 | CHISP_1095 | Putative Co/Zn/Cd efflux system membrane fusion protein. | Macrolide export ATP-binding/permease protein MacB. | 0.969 |
CHISP_1043 | CHISP_1096 | Putative Co/Zn/Cd efflux system membrane fusion protein. | Macrolide export ATP-binding/permease protein MacB. | 0.969 |
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