Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_1105 | CHISP_1106 | Hypothetical protein. | UDP-2-acetamido-2-deoxy-D-glucuronic acid dehydrogenase (NAD+ cofactor). | 0.639 |
CHISP_1105 | CHISP_1107 | Hypothetical protein. | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. | 0.790 |
CHISP_1105 | CHISP_1108 | Hypothetical protein. | DegT/DnrJ/EryC1/StrS family protein. | 0.638 |
CHISP_1105 | CHISP_1109 | Hypothetical protein. | Glycosyl transferase, group 1. | 0.689 |
CHISP_1105 | CHISP_1110 | Hypothetical protein. | Hypothetical protein. | 0.647 |
CHISP_1105 | CHISP_1111 | Hypothetical protein. | UDP-N-acetylglucosamine 2-epimerase. | 0.781 |
CHISP_1105 | CHISP_1113 | Hypothetical protein. | Glycosyl transferase family 1. | 0.603 |
CHISP_1106 | CHISP_1105 | UDP-2-acetamido-2-deoxy-D-glucuronic acid dehydrogenase (NAD+ cofactor). | Hypothetical protein. | 0.639 |
CHISP_1106 | CHISP_1107 | UDP-2-acetamido-2-deoxy-D-glucuronic acid dehydrogenase (NAD+ cofactor). | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. | 0.945 |
CHISP_1106 | CHISP_1108 | UDP-2-acetamido-2-deoxy-D-glucuronic acid dehydrogenase (NAD+ cofactor). | DegT/DnrJ/EryC1/StrS family protein. | 0.942 |
CHISP_1106 | CHISP_1109 | UDP-2-acetamido-2-deoxy-D-glucuronic acid dehydrogenase (NAD+ cofactor). | Glycosyl transferase, group 1. | 0.774 |
CHISP_1106 | CHISP_1110 | UDP-2-acetamido-2-deoxy-D-glucuronic acid dehydrogenase (NAD+ cofactor). | Hypothetical protein. | 0.806 |
CHISP_1106 | CHISP_1111 | UDP-2-acetamido-2-deoxy-D-glucuronic acid dehydrogenase (NAD+ cofactor). | UDP-N-acetylglucosamine 2-epimerase. | 0.969 |
CHISP_1106 | CHISP_1113 | UDP-2-acetamido-2-deoxy-D-glucuronic acid dehydrogenase (NAD+ cofactor). | Glycosyl transferase family 1. | 0.645 |
CHISP_1107 | CHISP_1105 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. | Hypothetical protein. | 0.790 |
CHISP_1107 | CHISP_1106 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. | UDP-2-acetamido-2-deoxy-D-glucuronic acid dehydrogenase (NAD+ cofactor). | 0.945 |
CHISP_1107 | CHISP_1108 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. | DegT/DnrJ/EryC1/StrS family protein. | 0.942 |
CHISP_1107 | CHISP_1109 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. | Glycosyl transferase, group 1. | 0.774 |
CHISP_1107 | CHISP_1110 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. | Hypothetical protein. | 0.803 |
CHISP_1107 | CHISP_1111 | 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. | UDP-N-acetylglucosamine 2-epimerase. | 0.914 |
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