Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0081 | CHISP_0099 | ABC transporter, ATP-binding protein. | Sensor histidine kinase AtoS. | 0.836 |
CHISP_0081 | CHISP_0423 | ABC transporter, ATP-binding protein. | Serine/threonine-protein kinase PknB. | 0.896 |
CHISP_0081 | CHISP_0482 | ABC transporter, ATP-binding protein. | Adenylate cyclase. | 0.829 |
CHISP_0081 | CHISP_0862 | ABC transporter, ATP-binding protein. | Putative PAS/PAC sensor protein. | 0.824 |
CHISP_0081 | CHISP_1071 | ABC transporter, ATP-binding protein. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.824 |
CHISP_0081 | CHISP_1165 | ABC transporter, ATP-binding protein. | Serine/threonine protein kinase PrkC, regulator of stationary phase. | 0.859 |
CHISP_0081 | CHISP_2133 | ABC transporter, ATP-binding protein. | FHA domain containing protein. | 0.772 |
CHISP_0081 | CHISP_2148 | ABC transporter, ATP-binding protein. | Multi-sensor hybrid histidine kinase. | 0.862 |
CHISP_0081 | CHISP_2521 | ABC transporter, ATP-binding protein. | Multi-sensor hybrid histidine kinase. | 0.764 |
CHISP_0081 | CHISP_3395 | ABC transporter, ATP-binding protein. | Adenylate cyclase. | 0.824 |
CHISP_0099 | CHISP_0081 | Sensor histidine kinase AtoS. | ABC transporter, ATP-binding protein. | 0.836 |
CHISP_0099 | CHISP_0423 | Sensor histidine kinase AtoS. | Serine/threonine-protein kinase PknB. | 0.781 |
CHISP_0099 | CHISP_0482 | Sensor histidine kinase AtoS. | Adenylate cyclase. | 0.990 |
CHISP_0099 | CHISP_0862 | Sensor histidine kinase AtoS. | Putative PAS/PAC sensor protein. | 0.987 |
CHISP_0099 | CHISP_1071 | Sensor histidine kinase AtoS. | Serine phosphatase RsbU, regulator of sigma subunit. | 0.987 |
CHISP_0099 | CHISP_1165 | Sensor histidine kinase AtoS. | Serine/threonine protein kinase PrkC, regulator of stationary phase. | 0.848 |
CHISP_0099 | CHISP_2133 | Sensor histidine kinase AtoS. | FHA domain containing protein. | 0.742 |
CHISP_0099 | CHISP_2148 | Sensor histidine kinase AtoS. | Multi-sensor hybrid histidine kinase. | 0.997 |
CHISP_0099 | CHISP_2521 | Sensor histidine kinase AtoS. | Multi-sensor hybrid histidine kinase. | 0.993 |
CHISP_0099 | CHISP_3395 | Sensor histidine kinase AtoS. | Adenylate cyclase. | 0.978 |
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