STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_1183Maltose/maltodextrin ABC transporter, permease protein MalF. (300 aa)    
Predicted Functional Partners:
CHISP_1182
Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE.
 0.999
CHISP_1184
Maltose/maltodextrin ABC transporter, permease protein MalG.
 0.999
CHISP_1185
Maltose/maltodextrin transport ATP-binding protein MalK.
 
 0.999
CHISP_2098
Hypothetical protein.
  
 0.993
CHISP_1180
ABC transporter substrate-binding protein.
 
  
 0.916
CHISP_1181
ABC transporter ATP-binding protein.
  
 
 0.889
CHISP_0070
Sulfate ABC transporter, ATP-binding protein CysA.
  
  
 0.844
CHISP_0893
PAS/PAC sensor hybrid histidine kinase.
     
 0.784
CHISP_0081
ABC transporter, ATP-binding protein.
     
 0.783
CHISP_0632
Lipid A export ATP-binding/permease protein MsbA.
  
  
 0.761
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
Server load: low (18%) [HD]