Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0824 | CHISP_1299 | Orotate phosphoribosyltransferase. | Dihydroorotate dehydrogenase electron transfer subunit. | 0.971 |
CHISP_0824 | CHISP_1300 | Orotate phosphoribosyltransferase. | Dihydroorotate dehydrogenase, catalytic subunit. | 0.921 |
CHISP_0824 | CHISP_2033 | Orotate phosphoribosyltransferase. | Orotidine 5'-phosphate decarboxylase. | 0.986 |
CHISP_0824 | CHISP_2135 | Orotate phosphoribosyltransferase. | Carbamoyl-phosphate synthase large chain. | 0.880 |
CHISP_0824 | CHISP_2211 | Orotate phosphoribosyltransferase. | ferredoxin-NADP(+) reductase subunit alpha. | 0.936 |
CHISP_0824 | CHISP_3062 | Orotate phosphoribosyltransferase. | Aspartate carbamoyltransferase. | 0.940 |
CHISP_0824 | CHISP_3063 | Orotate phosphoribosyltransferase. | Dihydroorotase. | 0.968 |
CHISP_0824 | CHISP_3388 | Orotate phosphoribosyltransferase. | Carbamoyl-phosphate synthase large chain. | 0.880 |
CHISP_1299 | CHISP_0824 | Dihydroorotate dehydrogenase electron transfer subunit. | Orotate phosphoribosyltransferase. | 0.971 |
CHISP_1299 | CHISP_1300 | Dihydroorotate dehydrogenase electron transfer subunit. | Dihydroorotate dehydrogenase, catalytic subunit. | 0.999 |
CHISP_1299 | CHISP_2033 | Dihydroorotate dehydrogenase electron transfer subunit. | Orotidine 5'-phosphate decarboxylase. | 0.934 |
CHISP_1299 | CHISP_2135 | Dihydroorotate dehydrogenase electron transfer subunit. | Carbamoyl-phosphate synthase large chain. | 0.889 |
CHISP_1299 | CHISP_2212 | Dihydroorotate dehydrogenase electron transfer subunit. | NADPH-dependent glutamate synthase beta chain. | 0.968 |
CHISP_1299 | CHISP_3062 | Dihydroorotate dehydrogenase electron transfer subunit. | Aspartate carbamoyltransferase. | 0.921 |
CHISP_1299 | CHISP_3063 | Dihydroorotate dehydrogenase electron transfer subunit. | Dihydroorotase. | 0.970 |
CHISP_1299 | CHISP_3388 | Dihydroorotate dehydrogenase electron transfer subunit. | Carbamoyl-phosphate synthase large chain. | 0.889 |
CHISP_1300 | CHISP_0824 | Dihydroorotate dehydrogenase, catalytic subunit. | Orotate phosphoribosyltransferase. | 0.921 |
CHISP_1300 | CHISP_1299 | Dihydroorotate dehydrogenase, catalytic subunit. | Dihydroorotate dehydrogenase electron transfer subunit. | 0.999 |
CHISP_1300 | CHISP_1694 | Dihydroorotate dehydrogenase, catalytic subunit. | Phenylalanyl-tRNA synthetase beta chain. | 0.851 |
CHISP_1300 | CHISP_2033 | Dihydroorotate dehydrogenase, catalytic subunit. | Orotidine 5'-phosphate decarboxylase. | 0.935 |
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