STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_1328Chromosome (plasmid) partitioning protein ParB. (286 aa)    
Predicted Functional Partners:
CHISP_1327
Chromosome (plasmid) partitioning protein ParA.
 
 0.998
CHISP_1257
Chromosome (plasmid) partitioning protein ParA.
 
 
 0.948
CHISP_2716
Chromosome (plasmid) partitioning protein ParA.
 
 
 0.948
CHISP_1326
rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB.
  
  
 0.828
CHISP_2331
Cell division protein FtsK.
  
   
 0.732
CHISP_2562
16S rRNA methyltransferase GidB.
  
  
 0.675
CHISP_1319
Chromosomal replication initiator protein DnaA.
 
  
 0.628
CHISP_1330
Hypothetical protein.
     
 0.553
CHISP_3525
Chromosomal replication initiator protein DnaA.
 
  
 0.539
CHISP_1738
Homoserine dehydrogenase.
    
 0.532
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.