Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0746 | CHISP_1340 | Putative membrane protein. | Foldase protein PrsA. | 0.639 |
CHISP_0746 | CHISP_1586 | Putative membrane protein. | Outer membrane protein Imp, required for envelope biogenesis. | 0.758 |
CHISP_0746 | CHISP_2030 | Putative membrane protein. | Hypothetical protein. | 0.772 |
CHISP_0746 | CHISP_3344 | Putative membrane protein. | Hypothetical protein. | 0.768 |
CHISP_1337 | CHISP_1338 | dTDP-glucose 4,6-dehydratase. | Cell division transporter, ATP-binding protein FtsE. | 0.778 |
CHISP_1337 | CHISP_1339 | dTDP-glucose 4,6-dehydratase. | Methyltransferase. | 0.773 |
CHISP_1337 | CHISP_1340 | dTDP-glucose 4,6-dehydratase. | Foldase protein PrsA. | 0.773 |
CHISP_1337 | CHISP_1341 | dTDP-glucose 4,6-dehydratase. | Foldase protein PrsA. | 0.592 |
CHISP_1338 | CHISP_1337 | Cell division transporter, ATP-binding protein FtsE. | dTDP-glucose 4,6-dehydratase. | 0.778 |
CHISP_1338 | CHISP_1339 | Cell division transporter, ATP-binding protein FtsE. | Methyltransferase. | 0.798 |
CHISP_1338 | CHISP_1340 | Cell division transporter, ATP-binding protein FtsE. | Foldase protein PrsA. | 0.802 |
CHISP_1338 | CHISP_1341 | Cell division transporter, ATP-binding protein FtsE. | Foldase protein PrsA. | 0.605 |
CHISP_1339 | CHISP_1337 | Methyltransferase. | dTDP-glucose 4,6-dehydratase. | 0.773 |
CHISP_1339 | CHISP_1338 | Methyltransferase. | Cell division transporter, ATP-binding protein FtsE. | 0.798 |
CHISP_1339 | CHISP_1340 | Methyltransferase. | Foldase protein PrsA. | 0.803 |
CHISP_1339 | CHISP_1341 | Methyltransferase. | Foldase protein PrsA. | 0.678 |
CHISP_1340 | CHISP_0746 | Foldase protein PrsA. | Putative membrane protein. | 0.639 |
CHISP_1340 | CHISP_1337 | Foldase protein PrsA. | dTDP-glucose 4,6-dehydratase. | 0.773 |
CHISP_1340 | CHISP_1338 | Foldase protein PrsA. | Cell division transporter, ATP-binding protein FtsE. | 0.802 |
CHISP_1340 | CHISP_1339 | Foldase protein PrsA. | Methyltransferase. | 0.803 |
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