STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_1340Foldase protein PrsA. (430 aa)    
Predicted Functional Partners:
CHISP_1856
Peptidyl-prolyl cis-trans isomerase.
   
 0.827
CHISP_1339
Methyltransferase.
  
    0.803
CHISP_1338
Cell division transporter, ATP-binding protein FtsE.
       0.802
CHISP_1337
dTDP-glucose 4,6-dehydratase.
       0.773
CHISP_1341
Foldase protein PrsA.
 
     0.705
CHISP_2070
Hypothetical protein.
   
 
 0.677
CHISP_3344
Hypothetical protein.
  
 
   0.653
CHISP_0746
Putative membrane protein.
  
     0.639
CHISP_2030
Hypothetical protein.
  
     0.626
CHISP_1586
Outer membrane protein Imp, required for envelope biogenesis.
 
  
 0.611
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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