STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_1381Hypothetical protein. (400 aa)    
Predicted Functional Partners:
CHISP_3521
Flagellar biosynthesis protein FliS.
 
  
 0.870
CHISP_3522
Flagellar hook-associated protein FliD.
  
    0.832
CHISP_2466
Flagellar motor rotation protein MotB.
 
 
 0.826
CHISP_0760
Flagellar hook-associated protein FlgK.
 
  
 0.817
CHISP_0700
Metal dependent phosphohydrolase.
 
 
 0.783
CHISP_1710
Non-ribosomal peptide synthetase.
   
   0.766
CHISP_2467
Flagellar motor rotation protein MotA.
  
   0.733
CHISP_2453
RNA polymerase sigma factor for flagellar operon.
  
  
 0.721
CHISP_2469
Flagellar hook protein FlgE.
 
  
 0.721
CHISP_0429
OmpA/MotB domain protein.
  
    0.712
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.