Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_1392 | CHISP_1393 | Undecaprenyl diphosphate synthase. | Phosphatidate cytidylyltransferase. | 0.992 |
CHISP_1392 | CHISP_1394 | Undecaprenyl diphosphate synthase. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase. | 0.977 |
CHISP_1392 | CHISP_1395 | Undecaprenyl diphosphate synthase. | Membrane-associated zinc metalloprotease. | 0.960 |
CHISP_1392 | CHISP_1396 | Undecaprenyl diphosphate synthase. | Hypothetical protein. | 0.421 |
CHISP_1393 | CHISP_1392 | Phosphatidate cytidylyltransferase. | Undecaprenyl diphosphate synthase. | 0.992 |
CHISP_1393 | CHISP_1394 | Phosphatidate cytidylyltransferase. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase. | 0.959 |
CHISP_1393 | CHISP_1395 | Phosphatidate cytidylyltransferase. | Membrane-associated zinc metalloprotease. | 0.902 |
CHISP_1393 | CHISP_1396 | Phosphatidate cytidylyltransferase. | Hypothetical protein. | 0.421 |
CHISP_1394 | CHISP_1392 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase. | Undecaprenyl diphosphate synthase. | 0.977 |
CHISP_1394 | CHISP_1393 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase. | Phosphatidate cytidylyltransferase. | 0.959 |
CHISP_1394 | CHISP_1395 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase. | Membrane-associated zinc metalloprotease. | 0.907 |
CHISP_1394 | CHISP_1396 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase. | Hypothetical protein. | 0.421 |
CHISP_1395 | CHISP_1392 | Membrane-associated zinc metalloprotease. | Undecaprenyl diphosphate synthase. | 0.960 |
CHISP_1395 | CHISP_1393 | Membrane-associated zinc metalloprotease. | Phosphatidate cytidylyltransferase. | 0.902 |
CHISP_1395 | CHISP_1394 | Membrane-associated zinc metalloprotease. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase. | 0.907 |
CHISP_1395 | CHISP_1396 | Membrane-associated zinc metalloprotease. | Hypothetical protein. | 0.467 |
CHISP_1396 | CHISP_1392 | Hypothetical protein. | Undecaprenyl diphosphate synthase. | 0.421 |
CHISP_1396 | CHISP_1393 | Hypothetical protein. | Phosphatidate cytidylyltransferase. | 0.421 |
CHISP_1396 | CHISP_1394 | Hypothetical protein. | 1-deoxy-D-xylulose 5-phosphate reductoisomerase. | 0.421 |
CHISP_1396 | CHISP_1395 | Hypothetical protein. | Membrane-associated zinc metalloprotease. | 0.467 |