Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_1552 | CHISP_1553 | Hypothetical protein. | Radical SAM domain protein. | 0.773 |
CHISP_1552 | CHISP_1554 | Hypothetical protein. | Polysaccharide pyruvyl transferase CsaB. | 0.774 |
CHISP_1552 | CHISP_1555 | Hypothetical protein. | Glycosyl transferase, group 1 family protein. | 0.916 |
CHISP_1552 | CHISP_1556 | Hypothetical protein. | Glycosyl transferase, group 1 family protein. | 0.774 |
CHISP_1552 | CHISP_1557 | Hypothetical protein. | Glycosyl transferase, group 2 family protein. | 0.782 |
CHISP_1552 | CHISP_1558 | Hypothetical protein. | Hypothetical protein. | 0.593 |
CHISP_1552 | CHISP_1559 | Hypothetical protein. | Glycosyl transferase group 1. | 0.451 |
CHISP_1552 | CHISP_1560 | Hypothetical protein. | Hypothetical protein. | 0.450 |
CHISP_1552 | CHISP_1561 | Hypothetical protein. | Hypothetical protein. | 0.450 |
CHISP_1553 | CHISP_1552 | Radical SAM domain protein. | Hypothetical protein. | 0.773 |
CHISP_1553 | CHISP_1554 | Radical SAM domain protein. | Polysaccharide pyruvyl transferase CsaB. | 0.980 |
CHISP_1553 | CHISP_1555 | Radical SAM domain protein. | Glycosyl transferase, group 1 family protein. | 0.882 |
CHISP_1553 | CHISP_1556 | Radical SAM domain protein. | Glycosyl transferase, group 1 family protein. | 0.773 |
CHISP_1553 | CHISP_1557 | Radical SAM domain protein. | Glycosyl transferase, group 2 family protein. | 0.631 |
CHISP_1553 | CHISP_1558 | Radical SAM domain protein. | Hypothetical protein. | 0.450 |
CHISP_1553 | CHISP_1559 | Radical SAM domain protein. | Glycosyl transferase group 1. | 0.450 |
CHISP_1553 | CHISP_1560 | Radical SAM domain protein. | Hypothetical protein. | 0.450 |
CHISP_1553 | CHISP_1561 | Radical SAM domain protein. | Hypothetical protein. | 0.450 |
CHISP_1554 | CHISP_1552 | Polysaccharide pyruvyl transferase CsaB. | Hypothetical protein. | 0.774 |
CHISP_1554 | CHISP_1553 | Polysaccharide pyruvyl transferase CsaB. | Radical SAM domain protein. | 0.980 |
page 1 of 5