Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0180 | CHISP_1312 | N-acetylglucosamine-1-P-mutase. | Mannose-6-phosphate isomerase. | 0.556 |
CHISP_0180 | CHISP_1581 | N-acetylglucosamine-1-P-mutase. | Protein YcaR in KDO2-Lipid A biosynthesis cluster. | 0.529 |
CHISP_0180 | CHISP_2022 | N-acetylglucosamine-1-P-mutase. | Putative methyltransferase. | 0.636 |
CHISP_0837 | CHISP_1576 | Lipid-A-disaccharide synthase. | Lipid A biosynthesis lauroyl acyltransferase. | 0.766 |
CHISP_0837 | CHISP_1581 | Lipid-A-disaccharide synthase. | Protein YcaR in KDO2-Lipid A biosynthesis cluster. | 0.532 |
CHISP_1312 | CHISP_0180 | Mannose-6-phosphate isomerase. | N-acetylglucosamine-1-P-mutase. | 0.556 |
CHISP_1312 | CHISP_1581 | Mannose-6-phosphate isomerase. | Protein YcaR in KDO2-Lipid A biosynthesis cluster. | 0.542 |
CHISP_1576 | CHISP_0837 | Lipid A biosynthesis lauroyl acyltransferase. | Lipid-A-disaccharide synthase. | 0.766 |
CHISP_1576 | CHISP_1577 | Lipid A biosynthesis lauroyl acyltransferase. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.772 |
CHISP_1576 | CHISP_1578 | Lipid A biosynthesis lauroyl acyltransferase. | DNA polymerase III alpha subunit. | 0.794 |
CHISP_1576 | CHISP_1579 | Lipid A biosynthesis lauroyl acyltransferase. | Hypothetical protein. | 0.768 |
CHISP_1576 | CHISP_1580 | Lipid A biosynthesis lauroyl acyltransferase. | Hypothetical protein. | 0.532 |
CHISP_1576 | CHISP_1581 | Lipid A biosynthesis lauroyl acyltransferase. | Protein YcaR in KDO2-Lipid A biosynthesis cluster. | 0.556 |
CHISP_1577 | CHISP_1576 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Lipid A biosynthesis lauroyl acyltransferase. | 0.772 |
CHISP_1577 | CHISP_1578 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | DNA polymerase III alpha subunit. | 0.780 |
CHISP_1577 | CHISP_1579 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Hypothetical protein. | 0.773 |
CHISP_1577 | CHISP_1580 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Hypothetical protein. | 0.536 |
CHISP_1577 | CHISP_1581 | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | Protein YcaR in KDO2-Lipid A biosynthesis cluster. | 0.536 |
CHISP_1578 | CHISP_1576 | DNA polymerase III alpha subunit. | Lipid A biosynthesis lauroyl acyltransferase. | 0.794 |
CHISP_1578 | CHISP_1577 | DNA polymerase III alpha subunit. | 1-acyl-sn-glycerol-3-phosphate acyltransferase. | 0.780 |
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