STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_1608RNA methyltransferas. (190 aa)    
Predicted Functional Partners:
CHISP_1607
Amino acid permease.
 
   
 0.894
CHISP_1707
Multi-domain non-ribosomal peptide synthetase.
    
 0.638
CHISP_0729
CoA-disulfide reductase.
 
  
  0.602
CHISP_2585
Methionine synthase.
 
 
 0.561
CHISP_0519
Choline dehydrogenase.
  
  
  0.539
CHISP_2931
Type 11 methyltransferase.
    
 0.514
CHISP_3530
Methyltransferase.
 
  
 0.496
CHISP_1445
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein).
    
  0.491
CHISP_1444
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein).
    
  0.490
CHISP_2747
Acetylornithine aminotransferase.
    
 0.490
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
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