STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHISP_1619Translation elongation factor Tu. (401 aa)    
Predicted Functional Partners:
CHISP_1622
50S ribosomal protein L11p (L12e).
 0.995
CHISP_1389
Translation elongation factor Ts.
   
 0.994
CHISP_1623
50S ribosomal protein L1p (L10Ae).
 
 0.993
CHISP_1631
30S ribosomal protein S10p (S20e).
 
 0.991
CHISP_1633
50S ribosomal protein L4p (L1e).
 
 0.991
CHISP_1649
30S ribosomal protein S5p (S2e).
 
 0.991
CHISP_1624
50S ribosomal protein L10p (P0).
  
 
 0.990
CHISP_1628
30S ribosomal protein S12p (S23e).
  
 0.990
CHISP_1629
30S ribosomal protein S7p (S5e).
  
 0.990
CHISP_1632
50S ribosomal protein L3p (L3e).
  
 0.990
Your Current Organism:
Chitinispirillum alkaliphilum
NCBI taxonomy Id: 1008392
Other names: C. alkaliphilum, Chitinispirillum alkaliphilum Sorokin et al. 2016, DSM 24539, UNIQEM U893, haloalkaliphilic bacterium ACht6-1, strain ACht6-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.