Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0066 | CHISP_1668 | Sulfate adenylyltransferase subunit 1. | Peptidase M48. | 0.478 |
CHISP_0457 | CHISP_0458 | Chaperone protein DnaJ. | Heat shock protein GrpE. | 0.997 |
CHISP_0457 | CHISP_1668 | Chaperone protein DnaJ. | Peptidase M48. | 0.429 |
CHISP_0458 | CHISP_0457 | Heat shock protein GrpE. | Chaperone protein DnaJ. | 0.997 |
CHISP_0458 | CHISP_1668 | Heat shock protein GrpE. | Peptidase M48. | 0.559 |
CHISP_1179 | CHISP_1668 | LemA family protein. | Peptidase M48. | 0.420 |
CHISP_1666 | CHISP_1667 | Hypothetical protein. | LemA family protein. | 0.631 |
CHISP_1666 | CHISP_1668 | Hypothetical protein. | Peptidase M48. | 0.627 |
CHISP_1667 | CHISP_1666 | LemA family protein. | Hypothetical protein. | 0.631 |
CHISP_1667 | CHISP_1668 | LemA family protein. | Peptidase M48. | 0.908 |
CHISP_1667 | CHISP_1669 | LemA family protein. | tRNA-specific 2-thiouridylase MnmA. | 0.420 |
CHISP_1668 | CHISP_0066 | Peptidase M48. | Sulfate adenylyltransferase subunit 1. | 0.478 |
CHISP_1668 | CHISP_0457 | Peptidase M48. | Chaperone protein DnaJ. | 0.429 |
CHISP_1668 | CHISP_0458 | Peptidase M48. | Heat shock protein GrpE. | 0.559 |
CHISP_1668 | CHISP_1179 | Peptidase M48. | LemA family protein. | 0.420 |
CHISP_1668 | CHISP_1666 | Peptidase M48. | Hypothetical protein. | 0.627 |
CHISP_1668 | CHISP_1667 | Peptidase M48. | LemA family protein. | 0.908 |
CHISP_1668 | CHISP_1669 | Peptidase M48. | tRNA-specific 2-thiouridylase MnmA. | 0.446 |
CHISP_1668 | CHISP_1827 | Peptidase M48. | Farnesyl cysteine carboxyl-methyltransferase. | 0.549 |
CHISP_1668 | CHISP_2464 | Peptidase M48. | Flagellar motor switch protein FliM. | 0.639 |
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