Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
CHISP_0343 | CHISP_0867 | Dynein regulation protein LC7. | Type IV pilus biogenesis protein PilM. | 0.729 |
CHISP_0343 | CHISP_1706 | Dynein regulation protein LC7. | Hypothetical protein. | 0.449 |
CHISP_0867 | CHISP_0343 | Type IV pilus biogenesis protein PilM. | Dynein regulation protein LC7. | 0.729 |
CHISP_0867 | CHISP_1706 | Type IV pilus biogenesis protein PilM. | Hypothetical protein. | 0.477 |
CHISP_1704 | CHISP_1705 | Phenylacetate-CoA ligase. | Hypothetical protein. | 0.773 |
CHISP_1704 | CHISP_1706 | Phenylacetate-CoA ligase. | Hypothetical protein. | 0.800 |
CHISP_1705 | CHISP_1704 | Hypothetical protein. | Phenylacetate-CoA ligase. | 0.773 |
CHISP_1705 | CHISP_1706 | Hypothetical protein. | Hypothetical protein. | 0.746 |
CHISP_1706 | CHISP_0343 | Hypothetical protein. | Dynein regulation protein LC7. | 0.449 |
CHISP_1706 | CHISP_0867 | Hypothetical protein. | Type IV pilus biogenesis protein PilM. | 0.477 |
CHISP_1706 | CHISP_1704 | Hypothetical protein. | Phenylacetate-CoA ligase. | 0.800 |
CHISP_1706 | CHISP_1705 | Hypothetical protein. | Hypothetical protein. | 0.746 |
CHISP_1706 | CHISP_2830 | Hypothetical protein. | Iron-sulfur cluster-binding protein. | 0.457 |
CHISP_1706 | CHISP_2859 | Hypothetical protein. | Putative LmbE-like protein. | 0.595 |
CHISP_2830 | CHISP_1706 | Iron-sulfur cluster-binding protein. | Hypothetical protein. | 0.457 |
CHISP_2859 | CHISP_1706 | Putative LmbE-like protein. | Hypothetical protein. | 0.595 |